Passionate about multi-omic data analysis and the development of tools and applications, I joined Anna Niarakis’s team as Assistant Professor in 2026. My research focuses on the development of computational models applied to autoimmune diseases, and in my teaching role, I will be teaching on the L2 to M2 courses in the modules dedicated to data analysis and bioinformatics.
After obtaining a Master's in Modeling and Computer Science for Life Sciences (Lyon 1, 2016), I worked as a research engineer on the ProGénoMix proteomics platform for 17 months, where I designed and developed proteomics analysis methods (CEA). I developed pipelines to identify microbial strains present in samples and assess the presence of antibiotic resistance in the context of NRBC risks. I then continued with a mission to develop a web application using R-Shiny (4 months) within an environmental biology laboratory (LIEC, Metz). During my PhD (2018-2022), I designed a multi-omics data analysis method integrating metaproteomics, metagenomics, and geochemistry to identify the species present in a contaminated soil and analyze their roles (CEA). Subsequently, I joined CBI for a year, where I was responsible for the bioinformatics and biostatistics activities of Dr. Trouche's team. With these experiences, I was recruited to strengthen the bigA platform (CBI).
I am also part of the administrators of the CBI computing cluster (Pluton) and the organizing committee for the R-Toulouse meetings.
In September 2026, I was appointed Assistant Professor in Section 65, specialising in Bioinformatics, at the University of Toulouse, and I join the Cosysbio team led by Professor Anna Niarakis.
My favorites ❤️:
- Languages : R & Python
- Tools : Git, Quarto, Conda & Podman
- Expertises : proteomics, metaproteomics, metagenomics, as well as RNA-seq, ChIP-seq, DRIP-seq, scRNA-seq, and a bit of Hi-C.
- Games : Clair Obscur Expedition 33, Horizon Zero Down, Dofus, Diablo IV, etc.
