Publications

Team publications ImpRNA (Cavaille)

Thalalla Gamage S*, Bortolin-Cavaillé ML*, Link C, Bryson K, Sas-Chen A, Schwartz S, Cavaillé J, Meier JL.
Antisense pairing and SNORD13 structure guide RNA cytidine acetylation
RNA
2022 Sep rna.079254.122. doi: 10.1261/rna.079254.122. Online ahead of print. PMID: 3612712
Marty V, Butler J, Basile C, Chargui O, Chagraoui A, Guiard BP, De Deurwaerdère P, Cavaillé J.
Deleting Snord115 genes in mice remodels monoaminergic systems activity in the brain toward cortico-subcortical imbalances
Hum Mol Genet
2022 Aug 2022;ddac139. doi:10.1093/hmg/ddac139 Online ahead of print. PMID: 35951020
Kobayashi N, Okae H, Hiura H, Kubota N, Kobayashi EH, Shibata S, Oike A, Hori T, Kikutake C, Hamada H, Kaji H, Suyama M, Bortolin-Cavaillé ML, Cavaillé J, Arima T..
The microRNA cluster C19MC confers differentiation potential into trophoblast lineages upon human pluripotent stem cells.
Nat Commun.
2022 Jun 13(1):3071. doi: 10.1038/s41467-022-30775-w. PMID: 35654791 Free PMC article.
Bortolin-Cavaillé ML, Aurélie Q, Supuni TG, Thomas JM, Sas-Chen A, Sharma S, Plisson-Chastang C, Vandel L, Blader P, Lafontaine DLJ, Schwartz S, Meier JL, Cavaillé J..
Probing small ribosomal subunit RNA helix 45 acetylation across eukaryotic evolution
Nucleic Acids Res.
2022 Jun 1:gkac404. doi: 10.1093/nar/gkac404. Online ahead of print. PMID: 35648437
Hebras J, Marty V, Personnaz J, Mercier P, Krogh N, Nielsen H, Aguirrebengoa M, Seitz H, Pradere JP, Guiard BP, Cavaille J.
Reassessment of the involvement of Snord115 in the serotonin 2c receptor pathway in a genetically relevant mouse model
Elife. 2020 Oct 5;9:e60862
2020 Oct doi: 10.7554/eLife.60862. PMID: 33016258 Free PMC article
Hebras J, Krogh N, Marty V, Nielsen H, Cavaillé J.
Developmental changes of rRNA ribose methylations in the mouse
RNA Biol. 2020 Jan;17(1):150-164
2020 Jan doi: 10.1080/15476286.2019.1670598. Epub 2019 Sep 29. PMID: 31566069 Free PMC article
Marty V., and Cavaillé J.
Imprinted small noncoding RNA genes in brain function and behaviour
Current Opinion in Behavioral Sciences. 25:8–14
2019 Jan
Malnou E.C., Umlauf D., Mouysset M., Cavaillé J.
Imprinted MicroRNA Gene Clusters in the Evolution, Development, and Functions of Mammalian Placenta
Front Genet. 18: 9:706
2018 Jan
Thomas JM, Briney CA, Nance KD, Lopez JE, Thorpe AL, Fox SD, Bortolin-Cavaille ML, Sas-Chen A, Arango D, Oberdoerffer S, Cavaille J, Andresson T, Meier JL.
A Chemical Signature for Cytidine Acetylation in RNA
J Am Chem Soc. 140:12667-12670
2018 Jan
Castel D, Baghdadi MB, Mella S, Gayraud-Morel B, Marty V, Cavaillé J, Antoniewski C, Tajbakhsh S.
Small-RNA sequencing identifies dynamic microRNA deregulation during skeletal muscle lineage progression
Sci Rep. 9; 8:4208. doi: 10.1038/s41598-018-21991
2018 Jan
Cavaillé J.
Box C/D small nucleolar RNA genes and the Prader-Willi syndrome: a complex interplay
Wiley Interdiscip Rev RNA 8:1-22
2017 Aug
Marty V, Labialle S, Bortolin-Cavaillé ML, Ferreira De Medeiros G, Moisan MP, Florian C, Cavaillé J.
Deletion of the miR-379/miR-410 gene cluster at the imprinted Dlk1-Dio3 locus enhances anxiety-related behaviour
Hum Mol Genet. 2016 Feb 15;25(4):728-39
2016 Feb
Cavaillé J.
Lessons from viruses: Small non-coding RNA meets transcription factors
Bioessays 37:932
2015 Jan
Bieth E, Eddiry S, Gaston V, Lorenzini F, Buffet A, Conte Auriol F, Molinas M, Cailley D, Rooryck C, Arveiler B, Cavaillé J, Salles J-P, Tauber M .
Highly restricted deletion of the SNORD116 region is implicated in Prader-Willi syndrome
Eur J Hum Genet. 2014 Jun 11. doi: 10.1038/ejhg.2014.103
2014 Jan
Labialle S*, Marty V*, Bortolin-Cavaille M-L, Hoareau-Osman M, Pradère J-P, Valet P, Martin G. P, Cavaille J .
The miR-379/miR-410 cluster at the imprinted Dlk1-Dio3 domain controls neonatal metabolic adaptation
The EMBO J. 2014 Aug 14. pii: e201387038
2014 Jan
Preti M, O'Donohue MF, Montel-Lehry N, Bortolin-Cavaille ML, Choesmel V, Gleizes PE.
Gradual processing of the ITS1 from the nucleolus to the cytoplasm during synthesis of the human 18S rRNA
Nucleic acids research 41: 4709-4723
2013 Jan
Tauber M, Thuilleaux D and Cavaillé J.
Le syndrome de Prader-Willi
Chapitre 18. Aspects biologiques, moléculaires et cliniques de l’axe GH/IGF-1. Edition Springer
2012 Jan
Bortolin-Cavaille, M.L., and Cavaillé, J.
The SNORD115 (H/MBII-52) and SNORD116 (H/MBII-85) gene clusters at the imprinted Prader-Willi locus generate canonical box C/D snoRNAs
Nucleic Acids Research 40, 6800-6807
2012 Jan
Bellemer, C., Bortolin-Cavaille, M.L., Schmidt, U., Jensen, S.M., Kjems, J., Bertrand, E., and Cavaillé, J.
Microprocessor dynamics and interactions at endogenous imprinted C19MC microRNA genes
Journal of Cell Science 125, 2709-2720
2012 Jan
Girardot M, Cavaillé J and Feil R .
Small regulatory RNAs controlled by genomic imprinting and their contribution to human disease
Epigenetics. 2012 Dec 1;7(12):1341-8
2012 Jan
Labialle S, Vitali P and Cavaillé J .
Imprinted small non-coding RNA genes: time to decipher their physiological functions
Chapter 3. Non-codings RNAs and Epigenetic Regulation of Gene Expression: Drivers of Natural Selection. Edited by Kevin V. Morris. Caister Academic Press
2011 Jan
Desjobert, C., Renalier, M.H., Bergalet, J., Dejean, E., Joseph, N., Kruczynski, A., Soulier, J., Espinos, E., Meggetto, F., Cavaillé, J., Delsol, G., and Lamant, L.
MiR-29a down-regulation in ALK-positive anaplastic large cell lymphomas contributes to apoptosis blockade through MCL-1 overexpression
Blood 117, 6627-6637
2011 Jan
Labialle, S., and Cavaillé, J.
Do repeated arrays of regulatory small-RNA genes elicit genomic imprinting?
BioEssays 33, 565-573
2011 Jan
Dejean, E., Renalier, M.H., Foisseau, M., Agirre, X., Joseph, N., de Paiva, G.R., Al Saati, T., Soulier, J., Desjobert, C., Lamant, L., Prosper, F., Felsher, D.W., Cavaillé, J., Prats, H., Delsol, G., Giuriato, S., and Meggetto, F.
Hypoxia-microRNA-16 downregulation induces VEGF expression in anaplastic lymphoma kinase (ALK)-positive anaplastic large-cell lymphomas
Leukemia 25, 1882-1890
2011 Jan
Vitali, P*., Royo, H.*, Marty, V., Bortolin-Cavaille, M.L., and Cavaillé, J.
Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays
Journal of Cell Science 123, 70-83
2010 Jan
Noguer-Dance, M., Abu-Amero, S., Al-Khtib, M., Lefevre, A., Coullin, P., Moore, G.E., and Cavaillé, J.
The primate-specific microRNA gene cluster (C19MC) is imprinted in the placenta
Human Molecular Genetics 19, 3566-3582
2010 Jan
Bortolin-Cavaille, M.L., Dance, M., Weber, M., and Cavaillé, J.
C19MC microRNAs are processed from introns of large Pol-II, non-protein-coding transcripts
Nucleic Acids Research 37, 3464-3473
2010 Jan
Royo, H., and Cavaillé, J.
Non-coding RNAs in imprinted gene clusters
Biology of the Cell 100, 149-166
2008 Jan
Royo, H., Basyuk, E., Marty, V., Marques, M., Bertrand, E., and Cavaillé, J. .
Bsr, a nuclear-retained RNA with monoallelic expression
Molecular Biology of the Cell 18, 2817-2827
2007 Jan
Messaoudi, L., Yang, Y.G., Kinomura, A., Stavreva, D.A., Yan, G., Bortolin-Cavaille, M.L., Arakawa, H., Buerstedde, J.M., Hainaut, P., Cavaillé, J., Takata, M., and Van Dyck, E.
Subcellular distribution of human RDM1 protein isoforms and their nucleolar accumulation in response to heat shock and proteotoxic stress
Nucleic Acids Research 35, 6571-6587
2007 Jan
Lin, S.P., Coan, P., da Rocha, S.T., Seitz, H., Cavaillé, J., Teng, P.W., Takada, S., and Ferguson-Smith, A.C. .
Differential regulation of imprinting in the murine embryo and placenta by the Dlk1-Dio3 imprinting control region
Development 134, 417-426
2007 Jan
Royo, H., Bortolin, M.L., Seitz, H., and Cavaillé, J.
Small non-coding RNAs and genomic imprinting
Cytogenetic and Genome Research 113, 99-108
2006 Jan
Davis, E., Caiment, F., Tordoir, X., Cavaillé, J., Ferguson-Smith, A., Cockett, N., Georges, M., and Charlier, C.
RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus
Current Biology 15, 743-749
2005 Jan
Vitali, P., Basyuk, E., Le Meur, E., Bertrand, E., Muscatelli, F., Cavaillé, J., and Huttenhofer, A.
ADAR2-mediated editing of RNA substrates in the nucleolus is inhibited by C/D small nucleolar RNAs
The Journal of Cell Biology 169, 745-753
2005 Jan
Huttenhofer, A., Cavaillé, J., and Bachellerie, J.P.
Experimental RNomics: a global approach to identifying small nuclear RNAs and their targets in different model organisms
Methods Mol Biol 265, 409-428
2004 Jan
Seitz, H., Royo, H., Bortolin, M.L., Lin, S.P., Ferguson-Smith, A.C., and Cavaillé, J.
A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain
Genome Research 14, 1741-1748
2004 Jan
Seitz, H., Royo, H., Lin, S.P., Youngson, N., Ferguson-Smith, A.C., and Cavaillé, J.
Imprinted small RNA genes
Biological Chemistry 385, 905-911
2004 Jan
Lin, S.P., Youngson, N., Takada, S., Seitz, H., Reik, W., Paulsen, M., Cavaillé, J., and Ferguson-Smith, A.C.
Asymmetric regulation of imprinting on the maternal and paternal chromosomes at the Dlk1-Gtl2 imprinted cluster on mouse chromosome 12
Nature Genetics 35, 97-102
2003 Jan
Seitz, H., Youngson, N., Lin, S.P., Dalbert, S., Paulsen, M., Bachellerie, J.P., Ferguson-Smith, A.C., and Cavaillé, J.
Imprinted microRNA genes transcribed antisense to a reciprocally imprinted retrotransposon-like gene
Nature Genetics 34, 261-262
2003 Jan
Vitali, P., Royo, H., Seitz, H., Bachellerie, J.P., Huttenhofer, A., and Cavaillé, J. .
Identification of 13 novel human modification guide RNAs.
Nucleic Acids Research 31, 6543-6551
2003 Jan
Bachellerie, J.P., Cavaillé, J., and Huttenhofer, A.
The expanding snoRNA world
84, 775-790
2002 Jan
Cavaillé, J., Seitz, H., Paulsen, M., Ferguson-Smith, A.C., and Bachellerie, J.P.
Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region
Human Molecular Genetics 11, 1527-1538
2002 Jan
Cavaillé, J., Vitali, P., Basyuk, E., Huttenhofer, A., and Bachellerie, J.P.
A novel brain-specific box C/D small nucleolar RNA processed from tandemly repeated introns of a noncoding RNA gene in rats
The Journal of Biological Chemistry 276, 26374-26383
2001 Jan
Gaspin, C., Cavaillé, J., Erauso, G., and Bachellerie, J.P.
Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes
Journal of Molecular Biology 297, 895-906
2000 Jan
Cavaillé, J., Buiting, K., Kiefmann, M., Lalande, M., Brannan, C.I., Horsthemke, B., Bachellerie, J.P., Brosius, J., and Huttenhofer, A.
Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization
Proceedings of the National Academy of Sciences of the United States of America (PNAS) 97, 14311-14316
2000 Jan
Cavaillé, J., Chetouani, F., and Bachellerie, J.P.
The yeast Saccharomyces cerevisiae YDL112w ORF encodes the putative 2'-O-ribose methyltransferase catalyzing the formation of Gm18 in tRNAs
RNA 5, 66-81
1999 Jan
Cavaillé, J., and Bachellerie, J.P.
SnoRNA-guided ribose methylation of rRNA: structural features of the guide RNA duplex influencing the extent of the reaction
Nucleic Acids Research 26, 1576-1587
1998 Jan
Bachellerie, J.P., and Cavaillé, J.
Guiding ribose methylation of rRNA
Trends in Biochemical Sciences 22, 257-261
1997 Jan
Cavaillé, J., Hadjiolov, A.A., and Bachellerie, J.P.
Processing of mammalian rRNA precursors at the 3' end of 18S rRNA. Identification of cis-acting signals suggests the involvement of U13 small nucleolar RNA
European Journal of Biochemistry 242, 206-213
1996 Jan
Cavaillé, J., Nicoloso, M., and Bachellerie, J.P.
Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides
Nature 383, 732-735
1996 Jan
Cavaillé, J., and Bachellerie, J.P.
Processing of fibrillarin-associated snoRNAs from pre-mRNA introns: an exonucleolytic process exclusively directed by the common stem-box terminal structure
Biochimie 78, 443-456
1996 Jan
Bachellerie, J.P., Nicoloso, M., Qu, L.H., Michot, B., Caizergues-Ferrer, M., Cavaillé, J., and Renalier, M.H.
Novel intron-encoded small nucleolar RNAs with long sequence complementarities to mature rRNAs involved in ribosome biogenesis
Biochemistry and Cell Biology 73, 835-843
1995 Jan
Hadjiolova, K.V., Normann, A., Cavaillé, J., Soupene, E., Mazan, S., Hadjiolov, A.A., and Bachellerie, J.P.
Processing of truncated mouse or human rRNA transcribed from ribosomal minigenes transfected into mouse cells
Molecular and Cellular Biology 14, 4044-4056
1994 Jan
Lane, D., Cavaillé, J., and Chandler, M.
Induction of the SOS response by IS1 transposase
Journal of Molecular Biology 242, 339-350
1994 Jan
Kobayashi N, Okae H, Hiura H, Kubota N, Kobayashi EH, Shibata S, Oike A, Hori T, Kikutake C, Hamada H, Kaji H, Suyama M, Bortolin-Cavaillé ML, Cavaillé J, Arima T.
The microRNA cluster C19MC confers differentiation potential into trophoblast lineages upon human pluripotent stem cells.
Nature Commun
Bortolin-Cavaillé Marie-Line, Quillien Aurélie, Thalalla Gamage Supuni, Thomas Justin M., Sas-Chen Aldema, Sharma Sunny, Plisson-Chastang Célia, Vandel Laurence, Blader Patrick, Lafontaine Denis L.J., Schwartz Schraga, Meier Jordan L. and Cavaillé Jérôme.
Probing small ribosomal subunit RNA helix 45 acetylation across eukaryotic evolution
Nucleic Acids Res.
Bortolin-Cavaillé Marie-Line, Quillien Aurélie, Thalalla Gamage Supuni, Thomas Justin M., Sas-Chen Aldema, Sharma Sunny, Plisson-Chastang Célia, Vandel Laurence, Blader Patrick, Lafontaine Denis L.J., Schwartz Schraga, Meier Jordan L. and Cavaillé Jérôme.
Probing small ribosomal subunit RNA helix 45 acetylation across eukaryotic evolution
Nucleic Acids Res.

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